Mouse (GRCm39)
Description

cold shock domain containing E1, RNA binding [Source:MGI Symbol;Acc:MGI:92356]

Gene Synonyms

D3Jfr1, unr

About this transcript

This transcript has 20 exons, is annotated with 40 domains and features, is associated with 1868 variant alleles and maps to 437 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000029446.13Csde1-2014318798aaENSMUSP00000029446.9
 
Protein coding
CCDS38569Q3U1S6 Q91W50 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000199420.5Csde1-2154185767aaENSMUSP00000142703.2
 
Protein coding
CCDS79990Q8JZN2 GENCODE basicTSL:5
ENSMUST00000198180.5Csde1-2113849767aaENSMUSP00000142983.2
 
Protein coding
CCDS79990Q8JZN2 GENCODE basicTSL:1
ENSMUST00000197488.5Csde1-2063827767aaENSMUSP00000143524.2
 
Protein coding
CCDS79990Q8JZN2 GENCODE basicTSL:1
ENSMUST00000199240.5Csde1-2143457668aaENSMUSP00000143050.2
 
Protein coding
CCDS79991A0A0G2JF72 GENCODE basicTSL:1
ENSMUST00000199571.5Csde1-2163123767aaENSMUSP00000143028.2
 
Protein coding
CCDS79990Q8JZN2 GENCODE basicTSL:5
ENSMUST00000197827.5Csde1-2072671798aaENSMUSP00000143503.2
 
Protein coding
CCDS38569Q3U1S6 Q91W50 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000198174.2Csde1-2102584112aaENSMUSP00000142395.2
 
Nonsense mediated decay
A0A0G2JDJ7 TSL:1CDS 5' incomplete
ENSMUST00000195889.5Csde1-202733151aaENSMUSP00000142647.2
 
Nonsense mediated decay
A0A0G2JE62 TSL:5CDS 5' incomplete
ENSMUST00000198944.5Csde1-213814No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000197154.5Csde1-205604No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000198906.2Csde1-2124277No protein-
 
Retained intron
-TSL:1
ENSMUST00000196521.2Csde1-2031803No protein-
 
Retained intron
-TSL:NA
ENSMUST00000197844.2Csde1-208671No protein-
 
Retained intron
-TSL:1
ENSMUST00000200617.2Csde1-217612No protein-
 
Retained intron
-TSL:2
ENSMUST00000197939.2Csde1-209580No protein-
 
Retained intron
-TSL:2
ENSMUST00000196685.2Csde1-204506No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 20, Coding exons: 18, Transcript length: 4,318 bps, Translation length: 798 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q91W50

CCDS

This transcript is a member of the Mouse CCDS set: CCDS38569

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000029446.13

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.