Transcript: ENSMUST00000025077.7 Mtpap-201

Description

mitochondrial poly(A) polymerase [Source:MGI Symbol;Acc:MGI:1914690]

Gene Synonyms

0610027A18Rik, Papd1, Tent6

Location

Chromosome 18: 4,375,592-4,397,330 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 13 domains and features, is associated with 1383 variant alleles and maps to 201 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000024234.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000025077.7	Mtpap-201	2651	585aa	ENSMUSP00000025077.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37718	Q9D0D3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000234924.2	Mtpap-205	1880	338aa	ENSMUSP00000156990.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4L2Q3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000234422.2	Mtpap-203	2626	117aa	ENSMUSP00000157305.2	Nonsense mediated decay		A0A3Q4EC68	-
ENSMUST00000234186.2	Mtpap-202	2110	218aa	ENSMUSP00000157237.2	Nonsense mediated decay		A0A3Q4EI56	-
ENSMUST00000234614.2	Mtpap-204	3608	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000235025.2	Mtpap-206	922	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,651 bps, Translation length: 585 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9D0D3

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37718

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000025077.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000025077.7 Mtpap-201

Summary

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Transcript: ENSMUST00000025077.7 Mtpap-201

Summary

About Us

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