Mouse (GRCm39)
Description

serine palmitoyltransferase, long chain base subunit 1 [Source:MGI Symbol;Acc:MGI:1099431]

Gene Synonyms

Lcb1, Spt1

Location
About this transcript

This transcript has 15 exons, is annotated with 12 domains and features, is associated with 2792 variant alleles and maps to 349 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000021920.8Sptlc1-2012606473aaENSMUSP00000021920.7
 
Protein coding
CCDS26521O35704 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000221265.2Sptlc1-202612No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000221709.2Sptlc1-203670No protein-
 
Retained intron
-TSL:NA
Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,606 bps, Translation length: 473 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O35704

CCDS

This transcript is a member of the Mouse CCDS set: CCDS26521

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000021920.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.