Transcript: ENSMUST00000007139.6 Eif1b-201

Description

eukaryotic translation initiation factor 1B [Source:MGI Symbol;Acc:MGI:1916219]

Gene Synonyms

1500010M16Rik, 3110001N14Rik

Location

Chromosome 9: 120,321,557-120,324,396 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 10 domains and features, is associated with 677 variant alleles and maps to 194 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000006941.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000007139.6	Eif1b-201	1035	113aa	ENSMUSP00000007139.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23628	Q9CXU9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000217553.2	Eif1b-202	458	100aa	ENSMUSP00000149825.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A1L1SSA3	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,035 bps, Translation length: 113 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9CXU9

CCDS

This transcript is a member of the Mouse CCDS set: CCDS23628

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000007139.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000007139.6 Eif1b-201

Summary

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Transcript: ENSMUST00000007139.6 Eif1b-201

Summary

About Us

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