Transcript: ENSMUST00000003137.15 Cyp2c29-201

Description

cytochrome P450, family 2, subfamily c, polypeptide 29 [Source:MGI Symbol;Acc:MGI:103238]

Gene Synonyms

AHOH, AHOHase, Ah-2, Ahh-1, Cyp2c, P450-2C

Location

Chromosome 19: 39,275,518-39,319,143 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 27 domains and features, is associated with 2661 variant alleles and maps to 180 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000003053.18 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000003137.15	Cyp2c29-201	1783	490aa	ENSMUSP00000003137.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29793	Q64458	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000176624.8	Cyp2c29-202	1759	451aa	ENSMUSP00000135863.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3UT49	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000177087.2	Cyp2c29-203	2822	120aa	ENSMUSP00000135839.2	Nonsense mediated decay		H3BLM0	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,783 bps, Translation length: 490 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q64458

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29793

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000003137.15

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000003137.15 Cyp2c29-201

Summary

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Transcript: ENSMUST00000003137.15 Cyp2c29-201

Summary

About Us

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