Transcript: ENSMUST00000050519.8 Elfn1-201

Description

leucine rich repeat and fibronectin type III, extracellular 1 [Source:MGI Symbol;Acc:MGI:2442479]

Gene Synonyms

A930017N06Rik

Location

Chromosome 5: 139,893,698-139,960,477 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 27 domains and features, is associated with 4561 variant alleles and maps to 103 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000048988.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000050519.8	Elfn1-201	3832	828aa	ENSMUSP00000053869.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19816	Q8C8T7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000198608.2	Elfn1-202	413	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Transcript: ENSMUST00000050519.8 Elfn1-201

Protein summary

Protein domains for ENSMUSP00000053869.7

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Transcript: ENSMUST00000050519.8 Elfn1-201

Protein summary

Protein domains for ENSMUSP00000053869.7

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