Transcript: ENSMUST00000048432.6 Prelp-201

Description

proline arginine-rich end leucine-rich repeat [Source:MGI Symbol;Acc:MGI:2151110]

Gene Synonyms

7330409J17Rik, SLRR2A

Location

Chromosome 1: 133,838,042-133,849,152 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 31 domains and features, is associated with 1199 variant alleles and maps to 220 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000041577.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000048432.6	Prelp-201	3615	378aa	ENSMUSP00000048803.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15300	Q543S0 Q9JK53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000127583.2	Prelp-202	823	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Transcript: ENSMUST00000048432.6 Prelp-201

Protein summary

Protein domains for ENSMUSP00000048803.6

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Transcript: ENSMUST00000048432.6 Prelp-201

Protein summary

Protein domains for ENSMUSP00000048803.6

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