Transcript: ENSMUST00000038945.6 Phlda3-201

Description

pleckstrin homology like domain, family A, member 3 [Source:MGI Symbol;Acc:MGI:1351485]

Gene Synonyms

TDAG/lpl homolog 1, Tih1

Location

Chromosome 1: 135,693,857-135,696,874 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 788 variant alleles and maps to 162 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000041801.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000038945.6	Phlda3-201	1435	125aa	ENSMUSP00000040614.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35722	Q9WV95	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000136445.2	Phlda3-202	569	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Transcript: ENSMUST00000038945.6 Phlda3-201

Protein summary

Protein domains for ENSMUSP00000040614.6

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Transcript: ENSMUST00000038945.6 Phlda3-201

Protein summary

Protein domains for ENSMUSP00000040614.6

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