Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: 6820431F20Rik ENSMUSG00000121492

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Description

cadherin 11 pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:547150]

Location

Chromosome 8: 20,143,722-20,180,155 forward strand.

GRCm39:CM001001.3

About this gene

This gene has 10 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000153748.2	6820431F20Rik-202	4659	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000242388.1	6820431F20Rik-205	4564	No protein	-	lncRNA		-
ENSMUST00000242640.1	6820431F20Rik-206	2466	No protein	-	lncRNA		-
ENSMUST00000245238.1	6820431F20Rik-210	2178	No protein	-	lncRNA		-
ENSMUST00000242130.1	6820431F20Rik-204	1726	No protein	-	lncRNA		-
ENSMUST00000242645.1	6820431F20Rik-207	1668	No protein	-	lncRNA		The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000246267.1	6820431F20Rik-211	1362	No protein	-	lncRNA		The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000241175.1	6820431F20Rik-203	1215	No protein	-	lncRNA		-
ENSMUST00000243435.1	6820431F20Rik-208	1024	No protein	-	lncRNA		-
ENSMUST00000243720.1	6820431F20Rik-209	818	No protein	-	lncRNA		-

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Summary

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