Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PRPF40A ENSMODG00000004179

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Description

pre-mRNA processing factor 40 homolog A [Source:NCBI gene;Acc:100014286]

Location

Primary_assembly 4: 155,319,111-155,561,657 reverse strand.

ASM229v1:CM000371.1

About this gene

This gene has 7 transcripts (splice variants) and 209 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMODT00000069467.1	PRPF40A-202	3131	1038aa	ENSMODP00000047392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSMODT00000061946.1	PRPF40A-203	3077	1020aa	ENSMODP00000049867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSMODT00000005264.5	PRPF40A-204	2954	979aa	ENSMODP00000005154.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6QNU6	-
ENSMODT00000069656.1	PRPF40A-201	2951	978aa	ENSMODP00000045450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSMODT00000060947.1	PRPF40A-205	2873	952aa	ENSMODP00000044765.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSMODT00000053918.1	PRPF40A-207	2786	923aa	ENSMODP00000052248.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSMODT00000063808.1	PRPF40A-206	2677	876aa	ENSMODP00000055525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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