Transcript: ENSGALT00010029680.1 MMP16-201

Description

matrix metallopeptidase 16 [Source:NCBI gene (formerly Entrezgene);Acc:396116]

Gene Synonyms

MT3-MMP

Location

About this transcript

This transcript has 12 exons, is annotated with 39 domains and features, is associated with 3567 variant alleles and maps to 25 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010029672.1	MMP16-204	4584	607aa	ENSGALP00010017266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSGALT00010029680.1	MMP16-201	4118	609aa	ENSGALP00010017270.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5PZ77	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSGALT00010029685.1	MMP16-202	4046	585aa	ENSGALP00010017273.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSGALT00010029690.1	MMP16-203	3956	555aa	ENSGALP00010017277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 12, Coding exons: 10, Transcript length: 4,118 bps, Translation length: 609 residues

Version

ENSGALT00010029680.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.