Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ADAMTS5 ENSGALG00010010712

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Description

ADAM metallopeptidase with thrombospondin type 1 motif 5 [Source:UniProtKB Gene Name;Acc:A0A8V0Y665]

Location

Primary_assembly 1: 103,167,001-103,210,984 reverse strand.

bGalGal1.mat.broiler.GRCg7b:CM028482.1

About this gene

This gene has 5 transcripts (splice variants), 197 orthologues and 24 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSGALT00010025625.1	ADAMTS5-205	2649	882aa	ENSGALP00010014446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Y665	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSGALT00010025644.1	ADAMTS5-201	5953	877aa	ENSGALP00010014452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1P3S7	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSGALT00010025648.1	ADAMTS5-202	5902	860aa	ENSGALP00010014456.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Y674	-
ENSGALT00010025658.1	ADAMTS5-203	5854	844aa	ENSGALP00010014461.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Y679	-
ENSGALT00010025636.1	ADAMTS5-204	2535	844aa	ENSGALP00010014449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8V0Y7R5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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