Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PRPF40A ENSECAG00000009113

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Description

pre-mRNA processing factor 40 homolog A [Source:VGNC Symbol;Acc:VGNC:21887]

Location

Primary_assembly 18: 34,656,306-34,712,926 reverse strand.

EquCab3.0:CM009165.1

About this gene

This gene has 6 transcripts (splice variants), 207 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000084649.1	PRPF40A-206	6980	1040aa	ENSECAP00000065820.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSECAT00000099248.1	PRPF40A-205	6918	1018aa	ENSECAP00000060010.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSECAT00000034036.2	PRPF40A-204	6044	972aa	ENSECAP00000036428.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HQV7	-
ENSECAT00000041707.2	PRPF40A-201	5310	830aa	ENSECAP00000031234.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2HAZ9	-
ENSECAT00000033744.2	PRPF40A-202	4919	816aa	ENSECAP00000023870.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q2GTD9	-
ENSECAT00000009902.4	PRPF40A-203	4151	874aa	ENSECAP00000007591.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6X982	-

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Summary

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