Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HMGB1 ENSECAG00000008439

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Description

high mobility group box 1 [Source:NCBI gene (formerly Entrezgene);Acc:100033873]

Gene Synonyms

HMG-1

Location

Primary_assembly 17: 9,853,637-9,859,789 reverse strand.

EquCab3.0:CM009164.1

About this gene

This gene has 3 transcripts (splice variants), 246 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSECAT00000008670.3	HMGB1-201	2255	204aa	ENSECAP00000006518.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9R8MR31	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSECAT00000140171.1	HMGB1-202	2314	197aa	ENSECAP00000056337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A9L0QY09	-
ENSECAT00000068754.2	HMGB1-203	627	159aa	ENSECAP00000047861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F5PHP0	-

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Summary

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