Transcript: ENSDART00000182078.1 PPP2CA-202

Description

zgc:56064 [Source:ZFIN;Acc:ZDB-GENE-040426-877]

Location

Chromosome 21: 45,351,660-45,363,871 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 16 domains and features, is associated with 497 variant alleles and maps to 231 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000053404.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151106.3	PPP2CA-201	1947	309aa	ENSDARP00000125818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6Z7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182078.1	PPP2CA-202	1640	309aa	ENSDARP00000152562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6Z7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000075443.3	PPP2CA-203	1640	309aa	ENSDARP00000069926.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6Z7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,640 bps, Translation length: 309 residues

Version

ENSDART00000182078.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000182078.1 PPP2CA-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000182078.1 PPP2CA-202

Summary

About Us

Get help

Our sister sites

Follow us