Transcript: ENSDART00000171232.2 ccdc106b-203

Description

coiled-coil domain containing 106b [Source:ZFIN;Acc:ZDB-GENE-050306-6]

Location

Chromosome 19: 10,325,367-10,330,831 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 203 variant alleles and maps to 185 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000058578.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000081465.7	ccdc106b-201	1753	357aa	ENSDARP00000075906.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LUD6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000171232.2	ccdc106b-203	1475	339aa	ENSDARP00000136964.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IQP1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000136653.2	ccdc106b-202	786	232aa	ENSDARP00000121152.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,475 bps, Translation length: 339 residues

Version

ENSDART00000171232.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000171232.2 ccdc106b-203

Summary

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Transcript: ENSDART00000171232.2 ccdc106b-203

Summary

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