Transcript: ENSDART00000152805.3 si:ch211-155i14.1-203

Description

si:ch211-155i14.1 [Source:ZFIN;Acc:ZDB-GENE-040724-246]

Location

Chromosome 20: 10,723,292-10,730,176 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 11 variant alleles and maps to 470 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000070757.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000152805.3	si:ch211-155i14.1-203	2573	532aa	ENSDARP00000126817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000104185.5	si:ch211-155i14.1-201	1566	521aa	ENSDARP00000126963.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000147174.2	si:ch211-155i14.1-202	1076	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 2,573 bps, Translation length: 532 residues

Version

ENSDART00000152805.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000152805.3 si:ch211-155i14.1-203

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Transcript: ENSDART00000152805.3 si:ch211-155i14.1-203

Summary

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