Transcript: ENSDART00000148630.2 hspa4a-202

Description

heat shock protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2832]

Gene Synonyms

hspa4l, wu:fc41d05, wu:fi59h02, wu:fj35c08, zgc:55506

Location

About this transcript

This transcript has 13 exons, is annotated with 24 domains and features, is associated with 428 variant alleles and maps to 70 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000021037.10	hspa4a-201	3219	833aa	ENSDARP00000026086.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZU46	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148630.2	hspa4a-202	1837	551aa	ENSDARP00000123727.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W5B2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,837 bps, Translation length: 551 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000148630.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.