Transcript: ENSDART00000141100.3 RPS2-202

Description

ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-040426-2454]

Location

Chromosome 3: 18,398,876-18,400,693 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 86 variant alleles and maps to 197 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000077291.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138107.3	RPS2-203	919	280aa	ENSDARP00000117673.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NWC3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000110842.3	RPS2-204	890	280aa	ENSDARP00000101605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NWC3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141100.3	RPS2-202	777	111aa	ENSDARP00000117756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133878.2	RPS2-201	349	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 777 bps, Translation length: 111 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000141100.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000141100.3 RPS2-202

Summary

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Transcript: ENSDART00000141100.3 RPS2-202

Summary

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