Transcript: ENSDART00000122739.3 ctbp1-201

Description

C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]

Gene Synonyms

CtBP1, wu:fi43a11

Location

About this transcript

This transcript has 11 exons, is annotated with 15 domains and features, is associated with 488 variant alleles and maps to 209 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000122739.3	ctbp1-201	4952	449aa	ENSDARP00000107990.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9DEG7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144367.2	ctbp1-202	911	288aa	ENSDARP00000112747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEQ4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 4,952 bps, Translation length: 449 residues

Version

ENSDART00000122739.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.