Transcript: ENSDART00000085505.7 CTDSPL2-201

Description

CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]

Location

About this transcript

This transcript has 13 exons, is annotated with 13 domains and features, is associated with 350 variant alleles and maps to 247 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000085505.7	CTDSPL2-201	4277	460aa	ENSDARP00000079940.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4QNX6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187370.1	CTDSPL2-202	6386	460aa	ENSDARP00000146809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4QNX6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 4,277 bps, Translation length: 460 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A4QNX6

Version

ENSDART00000085505.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.