Transcript: ENSDART00000079336.5 raraa-201

Description

retinoic acid receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-980526-284]

Gene Synonyms

NR1B1-A, RARalpha-A, etID309833.12, nr1b1a, rara, rara2a, zRAR, zRAR-alpha, zRAR-alpha-2.A, zgc:109797, zrara

Location

About this transcript

This transcript has 8 exons, is annotated with 43 domains and features, is associated with 1997 variant alleles and maps to 164 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000079336.5	raraa-201	2492	444aa	ENSDARP00000073792.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q90271	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000166796.2	raraa-202	1591	447aa	ENSDARP00000139532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	T2DKU4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167090.2	raraa-203	638	83aa	ENSDARP00000132356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,492 bps, Translation length: 444 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q90271

Version

ENSDART00000079336.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.