Transcript: ENSDART00000065038.5 atf1-201

Description

activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]

Gene Synonyms

wu:fc92c07, zgc:64099

Location

About this transcript

This transcript has 8 exons, is annotated with 24 domains and features, is associated with 299 variant alleles and maps to 182 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000065038.5	atf1-201	2140	304aa	ENSDARP00000065037.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T351	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185446.1	atf1-202	5759	304aa	ENSDARP00000151713.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T351	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,140 bps, Translation length: 304 residues

Version

ENSDART00000065038.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.