Transcript: ENSDART00000039438.8 jkamp-201

Description

jnk1/mapk8 associated membrane protein [Source:ZFIN;Acc:ZDB-GENE-040718-382]

Gene Synonyms

zgc:63678, zgc:92212

Location

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 481 variant alleles and maps to 234 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000039438.8	jkamp-201	1869	309aa	ENSDARP00000029689.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R9P8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146786.2	jkamp-203	701	219aa	ENSDARP00000112532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QE48	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000130930.3	jkamp-202	857	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,869 bps, Translation length: 309 residues

Version

ENSDART00000039438.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.