Transcript: ENSDART00000028406.10 dlg1-201

Description

discs, large homolog 1 (Drosophila) [Source:NCBI gene;Acc:114446]

Gene Synonyms

SAP-97A, wu:fc34d02

Location

Chromosome 6: 29,860,776-30,082,922 forward strand.

About this transcript

This transcript has 25 exons, is annotated with 51 domains and features, is associated with 4020 variant alleles and maps to 329 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000009677.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000028406.10	dlg1-201	5039	909aa	ENSDARP00000036537.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FAT1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000166782.2	dlg1-205	2888	873aa	ENSDARP00000140987.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IVD3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000169687.2	dlg1-206	2280	759aa	ENSDARP00000134848.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2U3TW57	-
ENSDART00000132170.3	dlg1-202	704	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000137198.2	dlg1-203	468	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000151569.2	dlg1-204	669	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 5,039 bps, Translation length: 909 residues

Version

ENSDART00000028406.10

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000028406.10 dlg1-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000028406.10 dlg1-201

Summary

About Us

Get help

Our sister sites

Follow us