Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: psme4a ENSDARG00000087911

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Description

proteasome activator subunit 4a [Source:NCBI gene;Acc:793897]

Gene Synonyms

si:ch73-101f17.1

Location

Chromosome 13: 35,689,749-35,744,963 forward strand.

GRCz11:CM002897.2

About this gene

This gene has 3 transcripts (splice variants), 219 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000158726.2	psme4a-203	6984	1876aa	ENSDARP00000131347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IAF6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000128865.3	psme4a-201	5442	1813aa	ENSDARP00000107489.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	T1ECT6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000130050.3	psme4a-202	5409	1802aa	ENSDARP00000107560.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0A0MPN8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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