Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: otulinb ENSDARG00000079886

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Description

OTU deubiquitinase with linear linkage specificity b [Source:ZFIN;Acc:ZDB-GENE-070912-627]

Gene Synonyms

fam105bb, si:dkeyp-106c5.3, wu:fc69a03

Location

Chromosome 2: 31,942,390-31,952,001 forward strand.

GRCz11:CM002886.2

About this gene

This gene has 6 transcripts (splice variants), 148 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146758.3	otulinb-206	1761	409aa	ENSDARP00000113277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0UY67	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138684.3	otulinb-204	906	258aa	ENSDARP00000122933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0UY68	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000137921.2	otulinb-203	661	176aa	ENSDARP00000115635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0UY69	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132113.3	otulinb-201	904	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000133182.3	otulinb-202	817	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000138965.2	otulinb-205	764	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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