Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: sec22a ENSDARG00000078328

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Description

SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]

Gene Synonyms

fc44f07, sec22l2, wu:fc44f07, zgc:56686

Location

Chromosome 9: 37,850,360-37,862,563 forward strand.

GRCz11:CM002893.2

About this gene

This gene has 3 transcripts (splice variants), 206 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000082165.7	sec22a-201	1600	303aa	ENSDARP00000076602.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBW3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185148.1	sec22a-203	4181	303aa	ENSDARP00000148147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBW3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133643.2	sec22a-202	767	205aa	ENSDARP00000118013.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QC92	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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