Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: prdm16 ENSDARG00000078324

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Description

PR domain containing 16 [Source:ZFIN;Acc:ZDB-GENE-080613-2]

Location

Chromosome 8: 48,480,529-48,541,957 forward strand.

GRCz11:CM002892.2

About this gene

This gene has 3 transcripts (splice variants), 80 orthologues, 1 paralogue and is associated with 48 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000122737.3	prdm16-202	2783	927aa	ENSDARP00000107731.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000086053.6	prdm16-201	2727	908aa	ENSDARP00000080488.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186631.1	prdm16-203	645	214aa	ENSDARP00000154637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Summary

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