Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: herc1 ENSDARG00000077901

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Description

HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8542]

Gene Synonyms

wu:fb14f01, zmp:0000000833

Location

Chromosome 7: 29,189,100-29,271,738 reverse strand.

GRCz11:CM002891.2

About this gene

This gene has 5 transcripts (splice variants), 230 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109030.5	herc1-201	15029	4852aa	ENSDARP00000098798.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBA7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171300.3	herc1-202	2990	997aa	ENSDARP00000140961.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IYT9	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000173780.2	herc1-204	1508	502aa	ENSDARP00000142861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSP4	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000173973.2	herc1-205	667	137aa	ENSDARP00000142936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSW5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000173598.2	herc1-203	615	205aa	ENSDARP00000142740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSC7	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

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Summary

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