Gene: icam3 ENSDARG00000076144

Description

intercellular adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060503-219]

Gene Synonyms

si:ch211-233g21.1, si:ch211-74m13.3, vcap1x1, vcap1x2

Location

GRCz11:CM002887.2

About this gene

This gene has 2 transcripts (splice variants), 351 orthologues, 6 paralogues and is associated with 5 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134958.3	icam3-202	1673	360aa	ENSDARP00000112816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JHX2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000114443.4	icam3-201	1212	318aa	ENSDARP00000099661.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8F2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary