Gene: plxnb1a ENSDARG00000075821

Description

plexin b1a [Source:ZFIN;Acc:ZDB-GENE-050302-63]

Gene Synonyms

im:7054247, si:ch211-220i18.5, wu:fb83a09

Location

Chromosome 23: 9,938,236-10,137,322 reverse strand.

GRCz11:CM002907.2

About this gene

This gene has 5 transcripts (splice variants), 201 orthologues, 14 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166663.2	plxnb1a-205	5838	1945aa	ENSDARP00000138525.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IRZ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000137308.3	plxnb1a-203	3945	812aa	ENSDARP00000117546.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QZQ3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000131669.2	plxnb1a-202	914	304aa	ENSDARP00000117176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QPY6	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000111518.3	plxnb1a-201	779	259aa	ENSDARP00000098140.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QKI9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000142442.2	plxnb1a-204	508	58aa	ENSDARP00000113338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QFZ9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Gene: plxnb1a ENSDARG00000075821

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Gene: plxnb1a ENSDARG00000075821

Summary

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