Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: chd9 ENSDARG00000074498

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Description

chromodomain helicase DNA binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-497]

Gene Synonyms

fb08b06, fb34c12, wu:fb08b06, wu:fb34c12

Location

Chromosome 7: 36,484,598-36,621,294 forward strand.

GRCz11:CM002891.2

About this gene

This gene has 3 transcripts (splice variants), 218 orthologues and 36 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173682.2	chd9-203	9964	2443aa	ENSDARP00000142882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSR4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173595.2	chd9-201	2203	650aa	ENSDARP00000142677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NS67	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173653.2	chd9-202	482	102aa	ENSDARP00000142826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSK9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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