Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: si:dkey-96f10.1 ENSDARG00000074457

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Description

si:dkey-96f10.1 [Source:ZFIN;Acc:ZDB-GENE-090312-154]

Location

Chromosome 23: 12,682,353-12,788,262 reverse strand.

GRCz11:CM002907.2

About this gene

This gene has 5 transcripts (splice variants), 195 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000103231.5	si:dkey-96f10.1-201	1467	488aa	ENSDARP00000094008.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QPT5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180549.1	si:dkey-96f10.1-205	1830	421aa	ENSDARP00000151495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QHC5	-
ENSDART00000139166.2	si:dkey-96f10.1-203	1026	342aa	ENSDARP00000122176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWZ1	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000146640.2	si:dkey-96f10.1-204	801	227aa	ENSDARP00000118674.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QI74	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135103.2	si:dkey-96f10.1-202	870	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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