Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: matn3a ENSDARG00000069245

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Description

matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]

Gene Synonyms

ns:zf-e359, si:dkeyp-50f7.4, zgc:101120

Location

Chromosome 20: 43,760,059-43,775,544 reverse strand.

GRCz11:CM002904.2

About this gene

This gene has 5 transcripts (splice variants), 178 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148809.3	matn3a-203	1954	337aa	ENSDARP00000125091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q68EK6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000149001.3	matn3a-204	1974	295aa	ENSDARP00000124655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QH94	-
ENSDART00000100608.6	matn3a-201	1463	460aa	ENSDARP00000091381.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QH95	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000100610.5	matn3a-202	1414	460aa	ENSDARP00000091383.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QH95	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153304.2	matn3a-205	740	247aa	ENSDARP00000127244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAH6	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

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Summary

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