Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: bloc1s3 ENSDARG00000068828

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Description

biogenesis of lysosomal organelles complex-1, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050913-10]

Gene Synonyms

hps8, zgc:114034

Location

Chromosome 15: 35,036,368-35,101,292 reverse strand.

GRCz11:CM002899.2

About this gene

This gene has 3 transcripts (splice variants), 149 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109593.5	bloc1s3-202	1430	204aa	ENSDARP00000100799.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V924	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000178430.2	bloc1s3-203	4449	204aa	ENSDARP00000144507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V924	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000099677.5	bloc1s3-201	952	204aa	ENSDARP00000090450.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V924	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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