Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: thtpa ENSDARG00000063049

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Description

thiamine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-070502-2]

Location

Chromosome 24: 14,581,864-14,601,780 forward strand.

GRCz11:CM002908.2

About this gene

This gene has 5 transcripts (splice variants), 170 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000189201.1	thtpa-205	3081	238aa	ENSDARP00000157280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QC87	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000091784.6	thtpa-201	972	222aa	ENSDARP00000086217.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBE4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000137337.3	thtpa-204	939	222aa	ENSDARP00000114246.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBE4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000136026.2	thtpa-203	868	238aa	ENSDARP00000118018.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QC87	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000134536.3	thtpa-202	490	117aa	ENSDARP00000123421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QC21	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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