Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: nrxn3b ENSDARG00000062693

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Description

neurexin 3b [Source:NCBI gene;Acc:570698]

Gene Synonyms

nrxn3ba, nrxn3bb

Location

Chromosome 20: 5,563,042-5,965,307 forward strand.

GRCz11:CM002904.2

About this gene

This gene has 4 transcripts (splice variants), 79 orthologues and 54 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127050.3	nrxn3b-202	5064	1687aa	ENSDARP00000107689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5P7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000090934.6	nrxn3b-201	4215	1404aa	ENSDARP00000085367.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QRL7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000149694.3	nrxn3b-203	3077	692aa	ENSDARP00000124790.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2B3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000150054.2	nrxn3b-204	532	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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