Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: b4galnt1a ENSDARG00000061520

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Description

beta-1,4-N-acetyl-galactosaminyl transferase 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1462]

Gene Synonyms

zgc:158609

Location

Chromosome 23: 28,097,282-28,123,767 reverse strand.

GRCz11:CM002907.2

About this gene

This gene has 2 transcripts (splice variants), 189 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000087815.4	b4galnt1a-201	2066	532aa	ENSDARP00000082248.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L229	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142514.2	b4galnt1a-202	788	236aa	ENSDARP00000122229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHK1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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