Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RAPGEF2 ENSDARG00000061459

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Description

si:dkey-253i9.4 [Source:ZFIN;Acc:ZDB-GENE-090313-280]

Location

Chromosome 1: 21,135,012-21,204,114 reverse strand.

GRCz11:CM002885.2

About this gene

This gene has 5 transcripts (splice variants), 150 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141077.3	RAPGEF2-203	5029	1463aa	ENSDARP00000120972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QI83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000087670.6	RAPGEF2-204	8333	1278aa	ENSDARP00000082104.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QPF1	-
ENSDART00000188893.1	RAPGEF2-205	8309	1270aa	ENSDARP00000148095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q4T5	-
ENSDART00000146630.2	RAPGEF2-202	4729	1316aa	ENSDARP00000118432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QJ00	-
ENSDART00000146183.2	RAPGEF2-201	535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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