Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: efcab1 ENSDARG00000061377

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Description

EF-hand calcium binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-040914-40]

Gene Synonyms

im:6911536, si:ch211-173p18.9

Location

Chromosome 19: 40,182,641-40,186,328 reverse strand.

GRCz11:CM002903.2

About this gene

This gene has 2 transcripts (splice variants), 193 orthologues and 28 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000087474.8	efcab1-201	771	216aa	ENSDARP00000081908.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LWZ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150972.2	efcab1-202	602	109aa	ENSDARP00000125834.1	Nonsense mediated decay	I3ISF7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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