Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: atp2a3 ENSDARG00000060978

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Description

ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]

Gene Synonyms

si:dkey-205l20.1

Location

Chromosome 5: 31,168,096-31,269,354 forward strand.

GRCz11:CM002889.2

About this gene

This gene has 3 transcripts (splice variants), 208 orthologues and 26 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000192271.1	atp2a3-203	5870	1005aa	ENSDARP00000154326.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QJH4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000086443.7	atp2a3-201	5899	991aa	ENSDARP00000080878.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q4P9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000133432.2	atp2a3-202	5467	932aa	ENSDARP00000121065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BIP1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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