Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: agr1 ENSDARG00000060682

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Description

anterior gradient 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7249]

Gene Synonyms

Ag1, DAg1, fl24a12, wu:fl24a12, zgc:165571

Location

Chromosome 9: 45,591,239-45,603,009 reverse strand.

GRCz11:CM002893.2

About this gene

This gene has 3 transcripts (splice variants), 82 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000085763.7	agr1-201	821	168aa	ENSDARP00000080198.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8B0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180465.1	agr1-203	585	168aa	ENSDARP00000155834.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8B0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139019.2	agr1-202	443	105aa	ENSDARP00000119506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEK9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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