Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: rpn1 ENSDARG00000059323

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Description

ribophorin I [Source:ZFIN;Acc:ZDB-GENE-030131-4286]

Gene Synonyms

wu:fa12h07, wu:fc68b07, wu:fc88a12

Location

Chromosome 11: 3,892,386-3,907,937 reverse strand.

GRCz11:CM002895.2

About this gene

This gene has 2 transcripts (splice variants) and 211 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000082409.5	rpn1-201	2505	598aa	ENSDARP00000076844.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QTB5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134858.3	rpn1-202	744	140aa	ENSDARP00000117047.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQM6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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