Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ccdc106b ENSDARG00000058578

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Description

coiled-coil domain containing 106b [Source:ZFIN;Acc:ZDB-GENE-050306-6]

Gene Synonyms

ccdc106, im:6909208, zgc:113396

Location

Chromosome 19: 10,325,360-10,330,831 reverse strand.

GRCz11:CM002903.2

About this gene

This gene has 3 transcripts (splice variants), 170 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000081465.7	ccdc106b-201	1753	357aa	ENSDARP00000075906.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LUD6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000171232.2	ccdc106b-203	1475	339aa	ENSDARP00000136964.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IQP1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000136653.2	ccdc106b-202	786	232aa	ENSDARP00000121152.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LUD5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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