Gene: otub1a ENSDARG00000055536

Description

OTU deubiquitinase, ubiquitin aldehyde binding 1a [Source:ZFIN;Acc:ZDB-GENE-040718-108]

Gene Synonyms

fb17f04, otub1l, wu:fb17f04, zgc:92685

Location

Chromosome 21: 28,502,340-28,513,055 forward strand.

GRCz11:CM002905.2

About this gene

This gene has 5 transcripts (splice variants), 145 orthologues, 1 paralogue and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077897.6	otub1a-201	1169	267aa	ENSDARP00000072363.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DH16	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140229.2	otub1a-204	792	217aa	ENSDARP00000115717.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6S6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000135683.2	otub1a-202	566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000144170.3	otub1a-205	532	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000139393.2	otub1a-203	517	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Gene: otub1a ENSDARG00000055536

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Gene: otub1a ENSDARG00000055536

Summary

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