Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: calcoco2 ENSDARG00000052515

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Description

calcium binding and coiled-coil domain 2 [Source:ZFIN;Acc:ZDB-GENE-050522-346]

Gene Synonyms

fj08c01, wu:fj08c01, zgc:110205

Location

Chromosome 12: 20,641,102-20,652,923 forward strand.

GRCz11:CM002896.2

About this gene

This gene has 2 transcripts (splice variants), 207 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152964.3	calcoco2-202	3251	527aa	ENSDARP00000127186.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGK5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133654.3	calcoco2-201	663	182aa	ENSDARP00000121662.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8C4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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