Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: pkp3a ENSDARG00000051861

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Description

plakophilin 3a [Source:ZFIN;Acc:ZDB-GENE-060512-114]

Gene Synonyms

pkp3, wu:fa97f09, wu:fk69a12, zgc:136656

Location

Chromosome 25: 22,151,271-22,191,983 reverse strand.

GRCz11:CM002909.2

About this gene

This gene has 4 transcripts (splice variants), 195 orthologues and 10 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000123211.3	pkp3a-202	3929	869aa	ENSDARP00000106964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8J9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191181.1	pkp3a-204	3111	869aa	ENSDARP00000145683.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8J9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000067478.7	pkp3a-201	1017	252aa	ENSDARP00000067477.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6N9I0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139110.2	pkp3a-203	394	93aa	ENSDARP00000114409.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QFK1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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