Gene: cntn1b ENSDARG00000045685

Description

contactin 1b [Source:ZFIN;Acc:ZDB-GENE-041210-236]

Gene Synonyms

si:dkey-240a12.2

Location

GRCz11:CM002888.2

About this gene

This gene has 2 transcripts (splice variants), 205 orthologues, 86 paralogues and is associated with 3 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133157.3	cntn1b-202	4786	1039aa	ENSDARP00000116014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TYT0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000067166.6	cntn1b-201	4736	1031aa	ENSDARP00000067165.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R1C8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary