Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: FAM53C ENSDARG00000045127

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Description

zgc:175066 [Source:ZFIN;Acc:ZDB-GENE-091027-2]

Location

Chromosome 21: 30,256,952-30,284,404 reverse strand.

GRCz11:CM002905.2

About this gene

This gene has 3 transcripts (splice variants), 170 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000066363.6	FAM53C-201	2591	374aa	ENSDARP00000066362.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9JTF4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181492.1	FAM53C-203	5606	374aa	ENSDARP00000146358.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9JTF4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187069.1	FAM53C-202	5504	374aa	ENSDARP00000146879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9JTF4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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